diff --git a/deepdog/alt_bayes_run.py b/deepdog/alt_bayes_run.py
index 21535a7..b16b1b8 100644
--- a/deepdog/alt_bayes_run.py
+++ b/deepdog/alt_bayes_run.py
@@ -65,15 +65,19 @@ class AltBayesRun:
 	Parameters
 	----------
 	dot_inputs : Sequence[DotInput]
-			The dot inputs for this bayes run.
+	The dot inputs for this bayes run.
+
 	discretisations_with_names : Sequence[Tuple(str, pdme.model.Model)]
-			The models to evaluate.
+	The models to evaluate.
+
 	actual_model_discretisation : pdme.model.Discretisation
-			The discretisation for the model which is actually correct.
+	The discretisation for the model which is actually correct.
+
 	filename_slug : str
-			The filename slug to include.
+	The filename slug to include.
+
 	run_count: int
-			The number of runs to do.
+	The number of runs to do.
 	"""
 
 	def __init__(
diff --git a/deepdog/alt_bayes_run_simulpairs.py b/deepdog/alt_bayes_run_simulpairs.py
index 8faffed..7e71b5c 100644
--- a/deepdog/alt_bayes_run_simulpairs.py
+++ b/deepdog/alt_bayes_run_simulpairs.py
@@ -58,15 +58,19 @@ class AltBayesRunSimulPairs:
 	Parameters
 	----------
 	dot_inputs : Sequence[DotInput]
-					The dot inputs for this bayes run.
+	The dot inputs for this bayes run.
+
 	discretisations_with_names : Sequence[Tuple(str, pdme.model.Model)]
-					The models to evaluate.
+	The models to evaluate.
+
 	actual_model_discretisation : pdme.model.Discretisation
-					The discretisation for the model which is actually correct.
+	The discretisation for the model which is actually correct.
+
 	filename_slug : str
-					The filename slug to include.
+	The filename slug to include.
+
 	run_count: int
-					The number of runs to do.
+	The number of runs to do.
 	"""
 
 	def __init__(
diff --git a/deepdog/bayes_run.py b/deepdog/bayes_run.py
index 7c8117b..1270944 100644
--- a/deepdog/bayes_run.py
+++ b/deepdog/bayes_run.py
@@ -33,15 +33,19 @@ class BayesRun:
 	Parameters
 	----------
 	dot_inputs : Sequence[DotInput]
-			The dot inputs for this bayes run.
+	The dot inputs for this bayes run.
+
 	discretisations_with_names : Sequence[Tuple(str, pdme.model.Model)]
-			The models to evaluate.
+	The models to evaluate.
+
 	actual_model_discretisation : pdme.model.Discretisation
-			The discretisation for the model which is actually correct.
+	The discretisation for the model which is actually correct.
+
 	filename_slug : str
-			The filename slug to include.
+	The filename slug to include.
+
 	run_count: int
-			The number of runs to do.
+	The number of runs to do.
 	"""
 
 	def __init__(
diff --git a/deepdog/diagnostic.py b/deepdog/diagnostic.py
index a86f94e..4dfe12d 100644
--- a/deepdog/diagnostic.py
+++ b/deepdog/diagnostic.py
@@ -50,15 +50,19 @@ class Diagnostic:
 	Parameters
 	----------
 	dot_inputs : Sequence[DotInput]
-			The dot inputs for this diagnostic.
+	The dot inputs for this diagnostic.
+
 	discretisations_with_names : Sequence[Tuple(str, pdme.model.Model)]
-			The models to evaluate.
+	The models to evaluate.
+
 	actual_model_discretisation : pdme.model.Discretisation
-			The discretisation for the model which is actually correct.
+	The discretisation for the model which is actually correct.
+
 	filename_slug : str
-			The filename slug to include.
+	The filename slug to include.
+
 	run_count: int
-			The number of runs to do.
+	The number of runs to do.
 	"""
 
 	def __init__(