Compare commits

..

3 Commits
1.1.0 ... 1.2.0

Author SHA1 Message Date
093a3fb5c4 chore(release): 1.2.0
All checks were successful
gitea-physics/deepdog/pipeline/head This commit looks good
gitea-physics/deepdog/pipeline/tag This commit looks good
2024-05-08 22:24:28 -05:00
dc1d2d45a3 feat: adds additional matching regexes
All checks were successful
gitea-physics/deepdog/pipeline/head This commit looks good
2024-05-08 22:23:57 -05:00
f0e2fa3da9 feat: adds magnitude enabled parsing option 2024-05-03 10:44:06 -05:00
4 changed files with 49 additions and 3 deletions

View File

@@ -2,6 +2,14 @@
All notable changes to this project will be documented in this file. See [standard-version](https://github.com/conventional-changelog/standard-version) for commit guidelines.
## [1.2.0](https://gitea.deepak.science:2222/physics/deepdog/compare/1.1.0...1.2.0) (2024-05-09)
### Features
* adds additional matching regexes ([dc1d2d4](https://gitea.deepak.science:2222/physics/deepdog/commit/dc1d2d45a3e631c5efccce80f8a24fa87c6089e0))
* adds magnitude enabled parsing option ([f0e2fa3](https://gitea.deepak.science:2222/physics/deepdog/commit/f0e2fa3da9f5a5136908d691137a904fda4e3a9a))
## [1.1.0](https://gitea.deepak.science:2222/physics/deepdog/compare/1.0.1...1.1.0) (2024-05-03)

View File

@@ -11,12 +11,15 @@ _logger = logging.getLogger(__name__)
FILENAME_REGEX = r"(?P<timestamp>\d{8}-\d{6})-(?P<filename_slug>.*)\.realdata\.fast_filter\.bayesrun\.csv"
MODEL_REGEXES = [
r"geom_(?P<xmin>-?\d+)_(?P<xmax>-?\d+)_(?P<ymin>-?\d+)_(?P<ymax>-?\d+)_(?P<zmin>-?\d+)_(?P<zmax>-?\d+)-orientation_(?P<orientation>free|fixedxy|fixedz)-dipole_count_(?P<avg_filled>\d+)_(?P<field_name>\w*)"
r"geom_(?P<xmin>-?\d+)_(?P<xmax>-?\d+)_(?P<ymin>-?\d+)_(?P<ymax>-?\d+)_(?P<zmin>-?\d+)_(?P<zmax>-?\d+)-orientation_(?P<orientation>free|fixedxy|fixedz)-dipole_count_(?P<avg_filled>\d+)_(?P<field_name>\w*)",
r"geom_(?P<xmin>-?\d+)_(?P<xmax>-?\d+)_(?P<ymin>-?\d+)_(?P<ymax>-?\d+)_(?P<zmin>-?\d+)_(?P<zmax>-?\d+)-magnitude_(?P<log_magnitude>\d*\.?\d+)-orientation_(?P<orientation>free|fixedxy|fixedz)-dipole_count_(?P<avg_filled>\d+)_(?P<field_name>\w*)",
r"geom_(?P<xmin>-?\d*\.?\d+)_(?P<xmax>-?\d*\.?\d+)_(?P<ymin>-?\d*\.?\d+)_(?P<ymax>-?\d*\.?\d+)_(?P<zmin>-?\d*\.?\d+)_(?P<zmax>-?\d*\.?\d+)-magnitude_(?P<log_magnitude>\d*\.?\d+)-orientation_(?P<orientation>free|fixedxy|fixedz)-dipole_count_(?P<avg_filled>\d+)_(?P<field_name>\w*)"
]
FILE_SLUG_REGEXES = [
r"mock_tarucha-(?P<job_index>\d+)",
r"(?:(?P<mock>mock)_)?tarucha(?:_(?P<tarucha_run_id>\d+))?-(?P<job_index>\d+)",
r"(?P<tag>\w+)-(?P<job_index>\d+)",
]
@@ -27,7 +30,6 @@ class BayesrunOutputFilename:
path: pathlib.Path
@dataclasses.dataclass
class BayesrunColumnParsed:
"""
class for parsing a bayesrun while pulling certain special fields out
@@ -38,10 +40,21 @@ class BayesrunColumnParsed:
self.model_field_dict = {
k: v for k, v in groupdict.items() if k != "field_name"
}
self._groupdict_str = repr(groupdict)
def __str__(self):
return f"BayesrunColumnParsed[{self.column_field}: {self.model_field_dict}]"
def __repr__(self):
return f"BayesrunColumnParsed({self._groupdict_str})"
def __eq__(self, other):
if isinstance(other, BayesrunColumnParsed):
return (self.column_field == other.column_field) and (
self.model_field_dict == other.model_field_dict
)
return NotImplemented
@dataclasses.dataclass
class BayesrunModelResult:

View File

@@ -1,6 +1,6 @@
[tool.poetry]
name = "deepdog"
version = "1.1.0"
version = "1.2.0"
description = ""
authors = ["Deepak Mallubhotla <dmallubhotla+github@gmail.com>"]

View File

@@ -7,6 +7,7 @@ def test_parse_groupdict():
)
parsed = deepdog.results._parse_bayesrun_column(example_column_name)
assert parsed is not None
expected = deepdog.results.BayesrunColumnParsed(
{
"xmin": "-20",
@@ -23,6 +24,30 @@ def test_parse_groupdict():
assert parsed == expected
def test_parse_groupdict_with_magnitude():
example_column_name = (
"geom_-20_20_-10_10_0_5-magnitude_3.5-orientation_free-dipole_count_100_success"
)
parsed = deepdog.results._parse_bayesrun_column(example_column_name)
assert parsed is not None
expected = deepdog.results.BayesrunColumnParsed(
{
"xmin": "-20",
"xmax": "20",
"ymin": "-10",
"ymax": "10",
"zmin": "0",
"zmax": "5",
"orientation": "free",
"avg_filled": "100",
"log_magnitude": "3.5",
"field_name": "success",
}
)
assert parsed == expected
# def test_parse_no_match_column_name():
# parsed = deepdog.results.parse_bayesrun_column("There's nothing here")
# assert parsed is None