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physics:renovate/configure
physics:trash
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physics:sphinx
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pull from: physics:sphinx
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physics:sphinx
This repository has been archived on 2022-02-23. You can view files and clone it, but cannot push or open issues or pull requests.

1 Commits
master ... sphinx

Author SHA1 Message Date
Deepak
1fc1ea66ea
Adds sphinx docs which suck
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2021-08-29 11:23:09 -05:00
11 changed files with 580 additions and 3 deletions
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2
.gitignore vendored
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@ -70,7 +70,7 @@ instance/
.scrapy
# Sphinx documentation
docs/_build/
docs/build/
# PyBuilder
.pybuilder/

20
docs/Makefile Normal file
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@ -0,0 +1,20 @@
# Minimal makefile for Sphinx documentation
#
# You can set these variables from the command line, and also
# from the environment for the first two.
SPHINXOPTS ?=
SPHINXBUILD ?= sphinx-build
SOURCEDIR = source
BUILDDIR = build
# Put it first so that "make" without argument is like "make help".
help:
@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
.PHONY: help Makefile
# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)

35
docs/make.bat Normal file
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@ -0,0 +1,35 @@
@ECHO OFF
pushd %~dp0
REM Command file for Sphinx documentation
if "%SPHINXBUILD%" == "" (
set SPHINXBUILD=sphinx-build
)
set SOURCEDIR=source
set BUILDDIR=build
if "%1" == "" goto help
%SPHINXBUILD% >NUL 2>NUL
if errorlevel 9009 (
echo.
echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
echo.installed, then set the SPHINXBUILD environment variable to point
echo.to the full path of the 'sphinx-build' executable. Alternatively you
echo.may add the Sphinx directory to PATH.
echo.
echo.If you don't have Sphinx installed, grab it from
echo.http://sphinx-doc.org/
exit /b 1
)
%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
goto end
:help
%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
:end
popd

55
docs/source/conf.py Normal file
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@ -0,0 +1,55 @@
# Configuration file for the Sphinx documentation builder.
#
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html
# -- Path setup --------------------------------------------------------------
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
import os
import sys
sys.path.insert(0, os.path.abspath('.'))
# -- Project information -----------------------------------------------------
project = 'pathfinder'
copyright = '2021, Deepak Mallubhotla'
author = 'Deepak Mallubhotla'
# -- General configuration ---------------------------------------------------
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.autodoc',
'sphinx.ext.coverage',
'sphinx.ext.napoleon'
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = []
# -- Options for HTML output -------------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'alabaster'
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']

15
docs/source/index.rst Normal file
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@ -0,0 +1,15 @@
Welcome to pathfinder's documentation!
======================================
.. toctree::
:maxdepth: 2
:caption: Contents:
modules
Indices and tables
==================
* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`

7
docs/source/modules.rst Normal file
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@ -0,0 +1,7 @@
pathfinder
==========
.. toctree::
:maxdepth: 4
pathfinder

37
docs/source/pathfinder.model.rst Normal file
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@ -0,0 +1,37 @@
pathfinder.model package
========================
Submodules
----------
pathfinder.model.dot module
---------------------------
.. automodule:: pathfinder.model.dot
:members:
:undoc-members:
:show-inheritance:
pathfinder.model.model module
-----------------------------
.. automodule:: pathfinder.model.model
:members:
:undoc-members:
:show-inheritance:
pathfinder.model.staticdipole module
------------------------------------
.. automodule:: pathfinder.model.staticdipole
:members:
:undoc-members:
:show-inheritance:
Module contents
---------------
.. automodule:: pathfinder.model
:members:
:undoc-members:
:show-inheritance:

29
docs/source/pathfinder.rst Normal file
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@ -0,0 +1,29 @@
pathfinder package
==================
Subpackages
-----------
.. toctree::
:maxdepth: 4
pathfinder.model
Submodules
----------
pathfinder.meta module
----------------------
.. automodule:: pathfinder.meta
:members:
:undoc-members:
:show-inheritance:
Module contents
---------------
.. automodule:: pathfinder
:members:
:undoc-members:
:show-inheritance:

3
pathfinder/model/dot.py
View File

@ -33,7 +33,8 @@ class DotMeasurement():
Returns
----------
Returns the voltage from that dipole at the point.
float
The voltage from that dipole at the point.
'''
p = pt[0:3] # hardcoded here because chances
s = pt[3:6] # are we'll only ever work in 3d.

379
poetry.lock generated
View File

@ -1,3 +1,11 @@
[[package]]
name = "alabaster"
version = "0.7.12"
description = "A configurable sidebar-enabled Sphinx theme"
category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "atomicwrites"
version = "1.4.0"
@ -20,6 +28,36 @@ docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"]
tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface"]
tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins"]
[[package]]
name = "babel"
version = "2.9.1"
description = "Internationalization utilities"
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
[package.dependencies]
pytz = ">=2015.7"
[[package]]
name = "certifi"
version = "2021.5.30"
description = "Python package for providing Mozilla's CA Bundle."
category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "charset-normalizer"
version = "2.0.4"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
category = "dev"
optional = false
python-versions = ">=3.5.0"
[package.extras]
unicode_backport = ["unicodedata2"]
[[package]]
name = "colorama"
version = "0.4.4"
@ -39,6 +77,14 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
[package.extras]
toml = ["toml"]
[[package]]
name = "docutils"
version = "0.17.1"
description = "Docutils -- Python Documentation Utilities"
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
[[package]]
name = "flake8"
version = "3.9.2"
@ -52,6 +98,22 @@ mccabe = ">=0.6.0,<0.7.0"
pycodestyle = ">=2.7.0,<2.8.0"
pyflakes = ">=2.3.0,<2.4.0"
[[package]]
name = "idna"
version = "3.2"
description = "Internationalized Domain Names in Applications (IDNA)"
category = "dev"
optional = false
python-versions = ">=3.5"
[[package]]
name = "imagesize"
version = "1.2.0"
description = "Getting image size from png/jpeg/jpeg2000/gif file"
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
[[package]]
name = "iniconfig"
version = "1.1.1"
@ -60,6 +122,28 @@ category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "jinja2"
version = "3.0.1"
description = "A very fast and expressive template engine."
category = "dev"
optional = false
python-versions = ">=3.6"
[package.dependencies]
MarkupSafe = ">=2.0"
[package.extras]
i18n = ["Babel (>=2.7)"]
[[package]]
name = "markupsafe"
version = "2.0.1"
description = "Safely add untrusted strings to HTML/XML markup."
category = "dev"
optional = false
python-versions = ">=3.6"
[[package]]
name = "mccabe"
version = "0.6.1"
@ -154,6 +238,14 @@ category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
[[package]]
name = "pygments"
version = "2.10.0"
description = "Pygments is a syntax highlighting package written in Python."
category = "dev"
optional = false
python-versions = ">=3.5"
[[package]]
name = "pyparsing"
version = "2.4.7"
@ -199,6 +291,32 @@ toml = "*"
[package.extras]
testing = ["fields", "hunter", "process-tests", "six", "pytest-xdist", "virtualenv"]
[[package]]
name = "pytz"
version = "2021.1"
description = "World timezone definitions, modern and historical"
category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "requests"
version = "2.26.0"
description = "Python HTTP for Humans."
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
[package.dependencies]
certifi = ">=2017.4.17"
charset-normalizer = {version = ">=2.0.0,<2.1.0", markers = "python_version >= \"3\""}
idna = {version = ">=2.5,<4", markers = "python_version >= \"3\""}
urllib3 = ">=1.21.1,<1.27"
[package.extras]
socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"]
[[package]]
name = "scipy"
version = "1.5.4"
@ -210,6 +328,116 @@ python-versions = ">=3.6"
[package.dependencies]
numpy = ">=1.14.5"
[[package]]
name = "snowballstemmer"
version = "2.1.0"
description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms."
category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "sphinx"
version = "4.1.2"
description = "Python documentation generator"
category = "dev"
optional = false
python-versions = ">=3.6"
[package.dependencies]
alabaster = ">=0.7,<0.8"
babel = ">=1.3"
colorama = {version = ">=0.3.5", markers = "sys_platform == \"win32\""}
docutils = ">=0.14,<0.18"
imagesize = "*"
Jinja2 = ">=2.3"
packaging = "*"
Pygments = ">=2.0"
requests = ">=2.5.0"
snowballstemmer = ">=1.1"
sphinxcontrib-applehelp = "*"
sphinxcontrib-devhelp = "*"
sphinxcontrib-htmlhelp = ">=2.0.0"
sphinxcontrib-jsmath = "*"
sphinxcontrib-qthelp = "*"
sphinxcontrib-serializinghtml = ">=1.1.5"
[package.extras]
docs = ["sphinxcontrib-websupport"]
lint = ["flake8 (>=3.5.0)", "isort", "mypy (>=0.900)", "docutils-stubs", "types-typed-ast", "types-pkg-resources", "types-requests"]
test = ["pytest", "pytest-cov", "html5lib", "cython", "typed-ast"]
[[package]]
name = "sphinxcontrib-applehelp"
version = "1.0.2"
description = "sphinxcontrib-applehelp is a sphinx extension which outputs Apple help books"
category = "dev"
optional = false
python-versions = ">=3.5"
[package.extras]
lint = ["flake8", "mypy", "docutils-stubs"]
test = ["pytest"]
[[package]]
name = "sphinxcontrib-devhelp"
version = "1.0.2"
description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp document."
category = "dev"
optional = false
python-versions = ">=3.5"
[package.extras]
lint = ["flake8", "mypy", "docutils-stubs"]
test = ["pytest"]
[[package]]
name = "sphinxcontrib-htmlhelp"
version = "2.0.0"
description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files"
category = "dev"
optional = false
python-versions = ">=3.6"
[package.extras]
lint = ["flake8", "mypy", "docutils-stubs"]
test = ["pytest", "html5lib"]
[[package]]
name = "sphinxcontrib-jsmath"
version = "1.0.1"
description = "A sphinx extension which renders display math in HTML via JavaScript"
category = "dev"
optional = false
python-versions = ">=3.5"
[package.extras]
test = ["pytest", "flake8", "mypy"]
[[package]]
name = "sphinxcontrib-qthelp"
version = "1.0.3"
description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp document."
category = "dev"
optional = false
python-versions = ">=3.5"
[package.extras]
lint = ["flake8", "mypy", "docutils-stubs"]
test = ["pytest"]
[[package]]
name = "sphinxcontrib-serializinghtml"
version = "1.1.5"
description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)."
category = "dev"
optional = false
python-versions = ">=3.5"
[package.extras]
lint = ["flake8", "mypy", "docutils-stubs"]
test = ["pytest"]
[[package]]
name = "toml"
version = "0.10.2"
@ -234,12 +462,29 @@ category = "dev"
optional = false
python-versions = "*"
[[package]]
name = "urllib3"
version = "1.26.6"
description = "HTTP library with thread-safe connection pooling, file post, and more."
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
[package.extras]
brotli = ["brotlipy (>=0.6.0)"]
secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
[metadata]
lock-version = "1.1"
python-versions = "^3.8,<3.10"
content-hash = "223211dbc0d0b43607b649f98a88b1d7c2f07c9d7574508bd8f68f36787966b3"
content-hash = "c24b9a131366246119b2d28776b98d7430e983e25389ad6691928b6e78ab0673"
[metadata.files]
alabaster = [
{file = "alabaster-0.7.12-py2.py3-none-any.whl", hash = "sha256:446438bdcca0e05bd45ea2de1668c1d9b032e1a9154c2c259092d77031ddd359"},
{file = "alabaster-0.7.12.tar.gz", hash = "sha256:a661d72d58e6ea8a57f7a86e37d86716863ee5e92788398526d58b26a4e4dc02"},
]
atomicwrites = [
{file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
{file = "atomicwrites-1.4.0.tar.gz", hash = "sha256:ae70396ad1a434f9c7046fd2dd196fc04b12f9e91ffb859164193be8b6168a7a"},
@ -248,6 +493,18 @@ attrs = [
{file = "attrs-21.2.0-py2.py3-none-any.whl", hash = "sha256:149e90d6d8ac20db7a955ad60cf0e6881a3f20d37096140088356da6c716b0b1"},
{file = "attrs-21.2.0.tar.gz", hash = "sha256:ef6aaac3ca6cd92904cdd0d83f629a15f18053ec84e6432106f7a4d04ae4f5fb"},
]
babel = [
{file = "Babel-2.9.1-py2.py3-none-any.whl", hash = "sha256:ab49e12b91d937cd11f0b67cb259a57ab4ad2b59ac7a3b41d6c06c0ac5b0def9"},
{file = "Babel-2.9.1.tar.gz", hash = "sha256:bc0c176f9f6a994582230df350aa6e05ba2ebe4b3ac317eab29d9be5d2768da0"},
]
certifi = [
{file = "certifi-2021.5.30-py2.py3-none-any.whl", hash = "sha256:50b1e4f8446b06f41be7dd6338db18e0990601dce795c2b1686458aa7e8fa7d8"},
{file = "certifi-2021.5.30.tar.gz", hash = "sha256:2bbf76fd432960138b3ef6dda3dde0544f27cbf8546c458e60baf371917ba9ee"},
]
charset-normalizer = [
{file = "charset-normalizer-2.0.4.tar.gz", hash = "sha256:f23667ebe1084be45f6ae0538e4a5a865206544097e4e8bbcacf42cd02a348f3"},
{file = "charset_normalizer-2.0.4-py3-none-any.whl", hash = "sha256:0c8911edd15d19223366a194a513099a302055a962bca2cec0f54b8b63175d8b"},
]
colorama = [
{file = "colorama-0.4.4-py2.py3-none-any.whl", hash = "sha256:9f47eda37229f68eee03b24b9748937c7dc3868f906e8ba69fbcbdd3bc5dc3e2"},
{file = "colorama-0.4.4.tar.gz", hash = "sha256:5941b2b48a20143d2267e95b1c2a7603ce057ee39fd88e7329b0c292aa16869b"},
@ -306,14 +563,86 @@ coverage = [
{file = "coverage-5.5-pp37-none-any.whl", hash = "sha256:2a3859cb82dcbda1cfd3e6f71c27081d18aa251d20a17d87d26d4cd216fb0af4"},
{file = "coverage-5.5.tar.gz", hash = "sha256:ebe78fe9a0e874362175b02371bdfbee64d8edc42a044253ddf4ee7d3c15212c"},
]
docutils = [
{file = "docutils-0.17.1-py2.py3-none-any.whl", hash = "sha256:cf316c8370a737a022b72b56874f6602acf974a37a9fba42ec2876387549fc61"},
{file = "docutils-0.17.1.tar.gz", hash = "sha256:686577d2e4c32380bb50cbb22f575ed742d58168cee37e99117a854bcd88f125"},
]
flake8 = [
{file = "flake8-3.9.2-py2.py3-none-any.whl", hash = "sha256:bf8fd333346d844f616e8d47905ef3a3384edae6b4e9beb0c5101e25e3110907"},
{file = "flake8-3.9.2.tar.gz", hash = "sha256:07528381786f2a6237b061f6e96610a4167b226cb926e2aa2b6b1d78057c576b"},
]
idna = [
{file = "idna-3.2-py3-none-any.whl", hash = "sha256:14475042e284991034cb48e06f6851428fb14c4dc953acd9be9a5e95c7b6dd7a"},
{file = "idna-3.2.tar.gz", hash = "sha256:467fbad99067910785144ce333826c71fb0e63a425657295239737f7ecd125f3"},
]
imagesize = [
{file = "imagesize-1.2.0-py2.py3-none-any.whl", hash = "sha256:6965f19a6a2039c7d48bca7dba2473069ff854c36ae6f19d2cde309d998228a1"},
{file = "imagesize-1.2.0.tar.gz", hash = "sha256:b1f6b5a4eab1f73479a50fb79fcf729514a900c341d8503d62a62dbc4127a2b1"},
]
iniconfig = [
{file = "iniconfig-1.1.1-py2.py3-none-any.whl", hash = "sha256:011e24c64b7f47f6ebd835bb12a743f2fbe9a26d4cecaa7f53bc4f35ee9da8b3"},
{file = "iniconfig-1.1.1.tar.gz", hash = "sha256:bc3af051d7d14b2ee5ef9969666def0cd1a000e121eaea580d4a313df4b37f32"},
]
jinja2 = [
{file = "Jinja2-3.0.1-py3-none-any.whl", hash = "sha256:1f06f2da51e7b56b8f238affdd6b4e2c61e39598a378cc49345bc1bd42a978a4"},
{file = "Jinja2-3.0.1.tar.gz", hash = "sha256:703f484b47a6af502e743c9122595cc812b0271f661722403114f71a79d0f5a4"},
]
markupsafe = [
{file = "MarkupSafe-2.0.1-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:d8446c54dc28c01e5a2dbac5a25f071f6653e6e40f3a8818e8b45d790fe6ef53"},
{file = "MarkupSafe-2.0.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:36bc903cbb393720fad60fc28c10de6acf10dc6cc883f3e24ee4012371399a38"},
{file = "MarkupSafe-2.0.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:2d7d807855b419fc2ed3e631034685db6079889a1f01d5d9dac950f764da3dad"},
{file = "MarkupSafe-2.0.1-cp310-cp310-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl", hash = "sha256:add36cb2dbb8b736611303cd3bfcee00afd96471b09cda130da3581cbdc56a6d"},
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1
pyproject.toml
View File

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pytest-cov = "^2.10.1"
mypy = "^0.790"
Sphinx = "^4.1.2"
[build-system]
requires = ["poetry>=0.12"]